WormBase Tree Display for Gene: WBGene00133606

WBGene00133606 SMap: S_parent: Sequence: Cjap.Contig18154
  Identity: Version: 6
    Name: CGC_name: Cjp-chup-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA14402
      Molecular_name: CJA14402
        CJA14402.1
        JA52591
      Other_name: Cjp-chup-1 From_analysis: Inferred_from_orthology
      Public_name: Cjp-chup-1.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-chup-1
        4 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Cjp-chup-1.2
                Other_name: Cjp-chup-1
        5 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cjp-chup-1
                Other_name: Cjp-chup-1.2
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-chup-1.2
                Other_name: Cjp-chup-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: chup
    RNASeq_FPKM: WBls:0000004 5.23461 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 3.70629 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.62915 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        3.723 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        3.81684 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.754996 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        10.5169 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.13608 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        11.4921 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        11.8638 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.34987 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.35494 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.75955 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        5.82911 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        8.16417 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 3.70629 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        4.84767 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00198097
    Ortholog: WBGene00006477 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00094856 Pristionchus pacificus From_analysis: Inparanoid_8
      CBOVI.g3616 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP31.g24668 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g95 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00239.g7653 Caenorhabditis angaria From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07521 Oscheius tipulae From_analysis: WormBase-Compara
      WBGene00293140 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00129566 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00136367 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans chup-1. In C. elegans, chup-1 is involved in cholesterol import. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA14402
    Corresponding_transcript: CJA14402.1
    Other_sequence: HBC21643_1
      EX011296.1
  Experimental_info: Expr_pattern: Expr1090907
    Microarray_results: GPL14145_CJA14402_442-501_0.924_3_C
      GPL14145_CJA14402_618-677_0.947_1_A
      GPL14145_CJA14402_736-795_0.931_2_B
  Method: Gene