WormBase Tree Display for Gene: WBGene00133778

WBGene00133778 SMap: S_parent: Sequence: Cjap.Contig16638
  Identity: Version: 3
    Name: CGC_name: Cjp-lgmn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA14574
      Molecular_name: CJA14574
        CJA14574.1
        JA05304
      Public_name: Cjp-lgmn-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cjp-lgmn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgmn
    RNASeq_FPKM: WBls:0000004 83.5723 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 45.5336 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 36.2755 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        44.8226 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        53.3697 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 39.7205 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        47.3179 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        47.9296 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        58.0345 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        62.7015 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        64.7797 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        71.5249 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        73.4542 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        76.2681 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        87.3625 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 53.3697 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        55.4126 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00198243
      00198244
      00198245
      00198246
    Ortholog (33)
    Paralog: WBGene00123660 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cysteine-type endopeptidase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Is an ortholog of C. elegans lgmn-1. In C. elegans, lgmn-1 is involved in PERK-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA14574
    Corresponding_transcript: CJA14574.1
    Other_sequence (139)
  Experimental_info: Expr_pattern: Expr1075321
    Microarray_results: GPL14145_CJA14574_528-587_0.850_49_B
      GPL14145_CJA14574_718-777_0.693_163_C
      GPL14145_CJA14574_789-848_0.703_150_A
  Method: Gene