WormBase Tree Display for Gene: WBGene00133872

WBGene00133872 SMap: S_parent: Sequence: Cjap.Contig8520
  Identity: Version: 3
    Name: CGC_name: Cjp-thn-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA14668
      Molecular_name: CJA14668
        CJA14668.1
        JA61105
      Public_name: Cjp-thn-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cjp-thn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: thn
    RNASeq_FPKM: WBls:0000004 2.3277 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 1.50334 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.64294 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        1.7778 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.91267 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 104.908 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        123.341 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        206.486 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        22.0536 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        225.463 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        233.851 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        48.5895 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        66.4822 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        78.8953 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        91.9016 From_analysis: RNASeq.japonica.WBls:0000041.control_median
      WBls:0000101 48.5895 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        76.4704 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (36)
    Paralog: WBGene00120806 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120808 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126666 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135349 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138611 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00217940 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00182047 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130575 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212147 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Osmotin/thaumatin-like superfamily and Thaumatin family. Is an ortholog of C. elegans thn-1 and thn-2. In C. elegans, thn-1 is involved in defense response to Gram-negative bacterium and innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA14668
    Corresponding_transcript: CJA14668.1
    Other_sequence: CBC01692_1
      GW411093.1
      CR01128
      CBC11064_1
      PSC03641_1
      CRC11906_1
      CJC00255_1
  Experimental_info: Expr_pattern: Expr1085309
    Microarray_results: GPL14145_CJA14668_497-556_0.851_2_A
  Method: Gene