WormBase Tree Display for Gene: WBGene00133916

WBGene00133916 SMap: S_parent: Sequence: Cjap.Contig3944
  Identity: Version: 3
    Name: CGC_name: Cjp-cdc-5L From_analysis: Inferred_from_orthology
      Sequence_name: CJA14712
      Molecular_name: CJA14712
        CJA14712.1
        JA66455
      Public_name: Cjp-cdc-5L
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 03 Jul 2015 12:56:17 WBPerson2970 Name_change: CGC_name: Cjp-cdc-5L
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdc
    RNASeq_FPKM: WBls:0000004 48.1012 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 32.5393 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 28.274 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        30.7527 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        33.2314 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 11.0744 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        11.555 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        13.1192 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        21.4707 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        28.2065 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        29.5165 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        34.9423 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        40.7268 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        51.3754 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        51.8678 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
      WBls:0000101 29.0983 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        32.5393 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (31)
    Paralog: WBGene00129279 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: SANT/Myb domain; Myb-like DNA-binding domain; Pre-mRNA splicing factor component Cdc5p/Cef1, C-terminal; pre-mRNA splicing factor component; and Homeobox-like domain superfamily. Is an ortholog of C. elegans cdc-5L. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA14712
    Corresponding_transcript: CJA14712.1
    Other_sequence (56)
  Experimental_info: Expr_pattern: Expr1084326
    Microarray_results: GPL14145_CJA14712_1131-1190_0.882_26_A
      GPL14145_CJA14712_1254-1313_0.682_205_B
      GPL14145_CJA14712_1363-1422_0.922_7_C
  Method: Gene