WormBase Tree Display for Gene: WBGene00134500

WBGene00134500 SMap: S_parent: Sequence: Cjap.Contig17948
  Identity: Version: 3
    Name: CGC_name: Cjp-tln-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA15296
      Molecular_name: CJA15296a
        CJA15296a.1
        JA64732
        CJA15296b
        JA64343
        CJA15296b.1
      Public_name: Cjp-tln-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-tln-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tln
    RNASeq_FPKM: WBls:0000004 114.377 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 41.2765 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 64.3621 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        65.3026 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        66.2431 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 10.2847 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        10.7602 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        11.4026 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        17.5572 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        19.8833 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        20.2519 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        22.9466 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        25.0659 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        28.4897 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        32.5596 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 25.0659 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        34.2558 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00198862
      00198863
      00198864
    Ortholog (38)
    Paralog: WBGene00212350 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00135987 Caenorhabditis japonica From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to enable actin filament binding activity. Predicted to be involved in cell adhesion. Is an ortholog of C. elegans tln-1. In C. elegans, tln-1 is involved in negative regulation of epidermal growth factor receptor signaling pathway; regulation of vulval development; and vulval cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA15296a
      CJA15296b
    Corresponding_transcript: CJA15296a.1
      CJA15296b.1
    Other_sequence (48)
  Experimental_info: Expr_pattern: Expr1089222
    Microarray_results: GPL14145_CJA15296_7132-7191_0.795_58_C
      GPL14145_CJA15296_7513-7572_0.748_223_B
      GPL14145_CJA15296_7591-7650_0.970_1_A
  Method: Gene