WormBase Tree Display for Gene: WBGene00134573

WBGene00134573 SMap: S_parent: Sequence: Cjap.Contig17888
  Identity: Version: 2
    Name: CGC_name: Cjp-abts-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA15369
      Molecular_name: CJA15369a
        CJA15369a.1
        JA64200
        CJA15369b
        JA59361
        CJA15369c
        JA41969
        CJA15369b.1
        CJA15369c.1
      Public_name: Cjp-abts-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-abts-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: abts
    RNASeq_FPKM: WBls:0000004 68.8059 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 95.9792 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 55.1279 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        56.1577 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        57.1875 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 18.5278 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        19.9221 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        20.3873 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        20.8524 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        25.9412 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        29.128 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        3.44578 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        3.60861 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        41.1079 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        4.21625 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 25.9412 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        32.7171 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00198922
      00198923
      00198924
      00198925
    Ortholog (43)
    Paralog: WBGene00121262 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00124619 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00125279 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00207532 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00209214 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00215863 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable monoatomic anion transmembrane transporter activity and solute:inorganic anion antiporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane. Is an ortholog of C. elegans abts-1. In C. elegans, abts-1 is involved in several processes, including cholinergic synaptic transmission; regulation of GABAergic synaptic transmission; and response to serotonin. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA15369a
      CJA15369b
      CJA15369c
    Corresponding_transcript: CJA15369a.1
      CJA15369b.1
      CJA15369c.1
    Other_sequence (58)
  Experimental_info: Expr_pattern: Expr1071081
    Microarray_results: GPL14145_CJA15369_3251-3310_0.934_4_C
      GPL14145_CJA15369_3490-3549_0.471_417_A
      GPL14145_CJA15369_3572-3631_0.918_9_B
  Method: Gene