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WormBase Tree Display for Gene: WBGene00134580

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Name Class

WBGene00134580SMapS_parentSequenceCjap.Contig18213
IdentityVersion2
NameSequence_nameCJA15376
Molecular_nameCJA15376
CJA15376.1
JA10016
Public_nameCJA15376
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000443.9775From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002725.5642From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003840.0708From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
41.5497From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
43.0286From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004125.5237From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
29.3674From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
31.8631From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
32.2124From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
32.5844From_analysisRNASeq.japonica.WBls:0000041.control_median
32.9563From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
34.0923From_analysisRNASeq.japonica.WBls:0000041.control_mean
36.7076From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
38.0395From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
46.068From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:000010132.7215From_analysisRNASeq.japonica.total_over_all_stages.control_mean
32.9563From_analysisRNASeq.japonica.total_over_all_stages.control_median
Ortholog (32)
ParalogWBGene00125898Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00127016Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00127433Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00134024Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00136610Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00119382Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136680Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209323Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212990Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217851Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; Type I phosphodiesterase / nucleotide pyrophosphatase; and Alkaline-phosphatase-like, core domain superfamily. Is an ortholog of C. elegans T03G6.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA15376
Corresponding_transcriptCJA15376.1
Other_sequence (14)
Experimental_infoExpr_patternExpr1070448
Microarray_resultsGPL14145_CJA15376_1011-1070_0.904_10_C
GPL14145_CJA15376_1200-1259_0.915_6_B
GPL14145_CJA15376_1235-1294_0.868_41_A
MethodGene