WormBase Tree Display for Gene: WBGene00135478

WBGene00135478 SMap: S_parent: Sequence: Cjap.Contig18184
  Identity: Version: 3
    Name: CGC_name: Cjp-mkk-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16274
      Molecular_name: CJA16274a
        CJA16274a.1
        JA47358
        CJA16274b
        JA43968
        CJA16274b.1
      Public_name: Cjp-mkk-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-mkk-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mkk
    RNASeq_FPKM: WBls:0000004 20.0828 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 15.5809 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 13.5535 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        15.9066 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        18.2596 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 3.2153 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        5.73138 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        6.40322 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        6.49613 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        7.0012 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        7.02017 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        7.50627 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        8.68913 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        8.90366 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        9.21627 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 8.68913 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        9.51063 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00199627
      00199628
      00199629
    Ortholog (35)
    Paralog: WBGene00119534 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00122141 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123108 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00124826 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130096 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00138310 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00120689 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132408 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00218769 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans mkk-4. In C. elegans, mkk-4 is involved in axon regeneration; p38MAPK cascade; and regulation of developmental growth. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16274a
      CJA16274b
    Corresponding_transcript: CJA16274a.1
      CJA16274b.1
    Other_sequence (19)
  Experimental_info: Expr_pattern: Expr1072548
      Expr1088837
    Microarray_results: GPL14145_CJA16274_503-562_0.908_5_B
      GPL14145_CJA16274_662-721_0.659_96_A
      GPL14145_CJA16274_894-953_0.841_38_C
      GPL14145_CJA21361_67-126_0.948_1_A
  Method: Gene