WormBase Tree Display for Gene: WBGene00135855

WBGene00135855 SMap: S_parent: Sequence: Cjap.Contig18125
  Identity: Version: 3
    Name: CGC_name: Cjp-hrpu-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16651
      Molecular_name: CJA16651
        CJA16651.1
        JA43140
      Public_name: Cjp-hrpu-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 16 Feb 2017 15:39:40 WBPerson2970 Name_change: CGC_name: Cjp-hrpu-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hrpu
    RNASeq_FPKM: WBls:0000004 16.4345 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 16.4094 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 12.6454 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        13.854 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        15.0626 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 12.0117 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        14.3599 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        16.0955 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        19.4265 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        25.3154 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        29.2735 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        5.45917 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        5.52576 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        5.8554 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        7.92791 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 13.4947 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        15.0626 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (25)
    Paralog: WBGene00127930 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: B30.2/SPRY domain superfamily; SPRY domain; Concanavalin A-like lectin/glucanase domain superfamily; P-loop containing nucleoside triphosphate hydrolase; and AAA domain. Is an ortholog of C. elegans hrpu-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16651
    Corresponding_transcript: CJA16651.1
    Other_sequence (57)
  Experimental_info: Expr_pattern: Expr1084966
    Microarray_results: GPL14145_CJA16651_2875-2934_0.815_55_B
      GPL14145_CJA16651_3375-3434_0.855_26_A
      GPL14145_CJA16651_3521-3580_0.898_4_C
  Method: Gene