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WormBase Tree Display for Gene: WBGene00135856

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Name Class

WBGene00135856SMapS_parentSequenceCjap.Contig17632
IdentityVersion2
NameCGC_nameCjp-btf-1From_analysisInferred_from_orthology
Sequence_nameCJA16654
Molecular_nameCJA16654
CJA16654.1
JA64554
Public_nameCjp-btf-1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-btf-1
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbtf
RNASeq_FPKMWBls:00000049.88144From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000279.63727From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000384.85763From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
6.02939From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
7.20114From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004111.8628From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
13.0082From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
13.1394From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.90889From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
3.91301From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
4.44812From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
4.57668From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
5.61744From_analysisRNASeq.japonica.WBls:0000041.control_median
6.65821From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
7.56441From_analysisRNASeq.japonica.WBls:0000041.control_mean
WBls:00001016.65821From_analysisRNASeq.japonica.total_over_all_stages.control_median
7.08406From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00199909
00199910
OrthologWBGene00000274Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00025797Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00053636Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00162672Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223655Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12878Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1103Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7358Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5680Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12357Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27086Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17294Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9636Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21252Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6200Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6302Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00579.g12431Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-btf-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7830Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00934.g16897Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10463Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005277Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09358Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23669Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20322900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00108074Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g6337Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241442Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266795Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289483Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00120499Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120547Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120698Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122941Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123319Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123434Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125284Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125413Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125695Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126243Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128387Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131076Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131100Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131218Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131787Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133301Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133375Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133607Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135476Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138042Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138483Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138638Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00176691Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00184625Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00206914Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212665Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213515Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00215205Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217201Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217598Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218057Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218524Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218891Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218975Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00219088Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Is an ortholog of C. elegans btf-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA16654
Corresponding_transcriptCJA16654.1
Other_sequenceMI03591
PT04449
MIC00489_1
Dviv_isotig31851
PT04427
MI01212
Experimental_infoExpr_patternExpr1078473
Microarray_resultsGPL14145_CJA16654_1386-1445_0.776_256_C
GPL14145_CJA16654_1536-1595_0.764_297_B
GPL14145_CJA16654_2326-2385_0.783_226_A
MethodGene