WormBase Tree Display for Gene: WBGene00136195

WBGene00136195 SMap: S_parent: Sequence: Cjap.Contig17926
  Identity: Version: 2
    Name: CGC_name: Cjp-vps-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16992
      Molecular_name: CJA16992
        CJA16992.1
        JA59503
      Public_name: Cjp-vps-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vps-4
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000004 63.9448 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 56.493 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 46.525 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        47.9118 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        49.2985 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 125.36 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        132.285 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        133.747 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        54.0204 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        67.4721 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        70.9313 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        75.1347 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        78.5856 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        82.0366 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        92.6234 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 67.4721 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        73.6345 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200218
      00200219
    Ortholog (32)
    Paralog: WBGene00132249 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133835 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133902 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138316 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans vps-4. In C. elegans, vps-4 is involved in mechanosensory behavior and protein localization to postsynaptic membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16992
    Corresponding_transcript: CJA16992.1
    Other_sequence (31)
  Experimental_info: Expr_pattern: Expr1077306
    Microarray_results: GPL14145_CJA16992_1028-1087_0.943_1_A
      GPL14145_CJA16992_621-680_0.930_3_B
      GPL14145_CJA16992_718-777_0.715_70_C
  Method: Gene