WormBase Tree Display for Gene: WBGene00136370

WBGene00136370 SMap: S_parent: Sequence: Cjap.Contig17857
  Identity: Version: 3
    Name: CGC_name: Cjp-sod-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA17167
      Molecular_name: CJA17167
        CJA17167.1
        JA40072
      Other_name: Cjp-sod-5 From_analysis: Inferred_from_orthology
      Public_name: Cjp-sod-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-sod-5
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-sod-1
                Other_name: Cjp-sod-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sod
    RNASeq_FPKM: WBls:0000004 156.653 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 218.733 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 331.896 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        352.161 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        372.426 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 258.803 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        267.596 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        357.587 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        367.006 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        373.889 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        378.031 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        382.173 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        384.583 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        401.342 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        425.301 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 303.108 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        367.006 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00200359
      00200360
      00200361
    Ortholog (37)
    Paralog: WBGene00132570 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable copper ion binding activity. Predicted to be involved in superoxide metabolic process. Is an ortholog of C. elegans sod-1. In C. elegans, sod-1 is involved in regulation of brood size; regulation of vulval development; and removal of superoxide radicals. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA17167
    Corresponding_transcript: CJA17167.1
    Other_sequence (233)
  Experimental_info: Expr_pattern: Expr1076455
    Microarray_results: GPL14145_CJA17167_146-205_0.881_9_B
      GPL14145_CJA17167_239-298_0.624_42_C
      GPL14145_CJA17167_326-385_0.888_7_A
  Method: Gene