WormBase Tree Display for Gene: WBGene00136809
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WBGene00136809 | SMap | S_parent | Sequence | Cjap.Contig8538 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 8 | |||||||
Name | CGC_name | Cjp-cof-2.1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | CJA17604 | ||||||||
Molecular_name | CJA17604 | ||||||||
CJA17604.1 | |||||||||
JA67006 | |||||||||
Public_name | Cjp-cof-2.1 | ||||||||
Species | Caenorhabditis japonica | ||||||||
History | Version_change | 1 | 29 Aug 2008 14:34:23 | WBPerson4055 | Event | Imported | from NGASP | ||
Name_change | CGC_name | Cjp-cof-2 | |||||||
2 | 27 Jan 2009 15:19:29 | WBPerson4055 | Name_change | CGC_name | Removed | ||||
3 | 29 Jul 2011 11:13:38 | WBPerson4055 | Event | Imported | Augustus import | ||||
4 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Cjp-cof-2.1 | ||||
5 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Cjp-cof-2.1 | ||||
7 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
8 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Cjp-cof-2.1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cof | ||||||||
RNASeq_FPKM | WBls:0000004 | 1.8e-05 | From_analysis (3) | ||||||
WBls:0000027 | 0 | From_analysis (3) | |||||||
WBls:0000038 | 1.2e-05 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092 | ||||||
2.4e-05 | From_analysis (2) | ||||||||
3.6e-05 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091 | |||||||
WBls:0000041 | 0.000154 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964 | ||||||
0.032083 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961 | |||||||
0.336021 | From_analysis | RNASeq.japonica.WBls:0000041.control_mean | |||||||
0.368171 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959 | |||||||
0.391266 | From_analysis | RNASeq.japonica.WBls:0000041.control_median | |||||||
0.41436 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960 | |||||||
0.445434 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962 | |||||||
0.526659 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963 | |||||||
0.901306 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093 | |||||||
0 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094 | |||||||
WBls:0000101 | 0.000154 | From_analysis | RNASeq.japonica.total_over_all_stages.control_median | ||||||
0.206787 | From_analysis | RNASeq.japonica.total_over_all_stages.control_mean | |||||||
Ortholog (32) | |||||||||
Paralog (3) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Collagen triple helix repeat and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans cof-2. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | CJA17604 | |||||||
Corresponding_transcript | CJA17604.1 | ||||||||
Experimental_info | Microarray_results | GPL14145_CJA17604_618-677_0.934_3_C | |||||||
Remark | [190208 pad] The CGC name Cjp-cof-2.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Cjp-cof-2.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |