WormBase Tree Display for Gene: WBGene00136816

WBGene00136816 SMap: S_parent: Sequence: Cjap.Contig17143
  Identity: Version: 2
    Name: CGC_name: Cjp-ttr-49 From_analysis: Inferred_from_orthology
      Sequence_name: CJA17611
      Molecular_name: CJA17611
        CJA17611.1
        JA65087
      Public_name: Cjp-ttr-49
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-ttr-49
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    RNASeq_FPKM: WBls:0000004 19.328 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 8.26215 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.5994 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        12.8892 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        8.30967 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 13.7748 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        15.4253 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        15.571 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        15.6427 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        15.7544 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        15.8661 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        17.9277 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        19.0517 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        22.201 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        25.8888 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 14.7854 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        15.571 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00200706
    Ortholog: WBGene00023485 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00038516 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
      WBGene00064920 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00155824 Caenorhabditis brenneri From_analysis: TreeFam
      Csp11.Scaffold629.g15768 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00600.g13380 Caenorhabditis sinica From_analysis: WormBase-Compara
    Paralog (44)
    Structured_description: Automated_description: Predicted to be located in cell surface. Is an ortholog of C. elegans ttr-49. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA17611
    Corresponding_transcript: CJA17611.1
    Other_sequence: CBC05592_1
      CRC09613_1
      CSC01084_1
      FD517080.1
      CR08182
  Experimental_info: Expr_pattern: Expr1085502
    Microarray_results: GPL14145_CJA17611_298-357_0.918_4_A
  Method: Gene