WormBase Tree Display for Gene: WBGene00136945
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WBGene00136945 | SMap | S_parent | Sequence | Cjap.Contig17636 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | Cjp-unc-52 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | CJA17741 | ||||||||
Molecular_name | CJA17741a | ||||||||
CJA17741a.1 | |||||||||
JA48430 | |||||||||
CJA17741b | |||||||||
JA43283 | |||||||||
CJA17741b.1 | |||||||||
Public_name | Cjp-unc-52 | ||||||||
Species | Caenorhabditis japonica | ||||||||
History | Version_change | 1 | 29 Aug 2008 14:34:23 | WBPerson4055 | Event | Imported | NGASP import | ||
2 | 29 Jul 2011 11:13:38 | WBPerson4055 | Event | Imported | Augustus import | ||||
3 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Cjp-unc-52 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000004 | 110.149 | From_analysis (3) | ||||||
WBls:0000027 | 105.938 | From_analysis (3) | |||||||
WBls:0000038 | 159.927 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091 | ||||||
162.98 | From_analysis (2) | ||||||||
166.033 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092 | |||||||
WBls:0000041 | 17.405 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961 | ||||||
22.2418 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960 | |||||||
22.8065 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963 | |||||||
25.3571 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962 | |||||||
26.9642 | From_analysis | RNASeq.japonica.WBls:0000041.control_median | |||||||
28.5713 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959 | |||||||
29.3654 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964 | |||||||
33.2336 | From_analysis | RNASeq.japonica.WBls:0000041.control_mean | |||||||
55.9782 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094 | |||||||
64.1432 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093 | |||||||
WBls:0000101 | 29.3654 | From_analysis | RNASeq.japonica.total_over_all_stages.control_median | ||||||
62.1474 | From_analysis | RNASeq.japonica.total_over_all_stages.control_mean | |||||||
Ortholog (33) | |||||||||
Paralog (13) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin I-set; Immunoglobulin-like domain; Immunoglobulin-like fold; Laminin IV; Laminin-type EGF domain; Immunoglobulin subtype 2; Low-density lipoprotein receptor domain class A; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Laminin EGF domain; Low-density lipoprotein (LDL) receptor class A repeat; Immunoglobulin subtype; Laminin B (Domain IV); and LDL receptor-like superfamily. Is an ortholog of C. elegans unc-52. In C. elegans, unc-52 is involved in several processes, including hemidesmosome assembly; muscle cell cellular homeostasis; and muscle structure development. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | CJA17741a | |||||||
CJA17741b | |||||||||
Corresponding_transcript | CJA17741a.1 | ||||||||
CJA17741b.1 | |||||||||
Other_sequence (169) | |||||||||
Experimental_info (2) | |||||||||
Method | Gene |