WormBase Tree Display for Gene: WBGene00137633

WBGene00137633 SMap: S_parent: Sequence: Cjap.Contig17564
  Identity: Version: 2
    Name: CGC_name: Cjp-let-381 From_analysis: Inferred_from_orthology
      Sequence_name: CJA18428
      Molecular_name: CJA18428
        CJA18428.1
        JA65363
      Public_name: Cjp-let-381
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-let-381
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: let
    RNASeq_FPKM: WBls:0000004 9.1101 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 4.35701 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.890293 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        1.21077 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.53125 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.376649 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.494215 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.973974 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.05053 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.07794 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.12592 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.20132 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.28297 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.45614 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.78772 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 1.20132 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        1.88555 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00201268
      00201269
      00201270
    Ortholog (33)
    Paralog: WBGene00128005 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129535 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00134152 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00135423 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00137835 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00124100 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00125678 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132586 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00138617 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00210959 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans let-381. In C. elegans, let-381 is involved in mesodermal cell fate specification; nematode larval development; and positive regulation of mesodermal cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA18428
    Corresponding_transcript: CJA18428.1
    Other_sequence: Dviv_isotig25947
      Acan_isotig02194
      JI173213.1
      Oden_isotig23420
  Experimental_info: Expr_pattern: Expr1087602
    Microarray_results: GPL14145_CJA18428_407-466_0.902_6_B
      GPL14145_CJA18428_506-565_0.842_26_A
      GPL14145_CJA18428_763-822_0.754_56_C
  Method: Gene