WormBase Tree Display for Gene: WBGene00138539

WBGene00138539 SMap: S_parent: Sequence: Cjap.Contig17185
  Identity: Version: 2
    Name: CGC_name: Cjp-cfi-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA19335
      Molecular_name: CJA19335
        CJA19335.1
        JA15976
      Public_name: Cjp-cfi-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-cfi-1
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cfi
    RNASeq_FPKM: WBls:0000004 38.3745 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 13.8368 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 10.0593 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        9.37995 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        9.71963 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
      WBls:0000041 1.74563 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.91881 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        4.14792 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        4.18479 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        4.35504 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        4.40814 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.46124 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        4.88221 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        5.02858 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        5.9389 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
      WBls:0000101 4.88221 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        8.08684 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00201972
    Ortholog (29)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans cfi-1. In C. elegans, cfi-1 is involved in negative regulation of transcription by RNA polymerase II; neuron fate specification; and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA19335
    Corresponding_transcript: CJA19335.1
    Other_sequence (17)
  Experimental_info: Expr_pattern: Expr1072193
    Microarray_results: GPL14145_CJA19335_1389-1448_0.972_1_A
      GPL14145_CJA19335_632-691_0.895_12_C
      GPL14145_CJA19335_838-897_0.917_6_B
  Method: Gene