WormBase Tree Display for Gene: WBGene00139858

WBGene00139858 SMap: S_parent: Sequence: Cbre_Contig132
  Identity: Version: 2
    Name: CGC_name: Cbn-lat-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN01133
      Molecular_name: CBN01133
        CBN01133.1
        CN31872
      Public_name: Cbn-lat-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-lat-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lat
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 102.766 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        51.383 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 16.3307 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        18.1807 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        20.3061 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        22.877 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        23.5469 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 15.0644 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        15.1414 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        15.2184 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 15.0842 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        21.3049 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00203033
      00203034
      00203035
      00203036
    Ortholog (34)
    Paralog: WBGene00191007 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139020 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00143090 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00143339 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00152217 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00156085 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00190181 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable G protein-coupled receptor activity and carbohydrate binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans lat-1. In C. elegans, lat-1 is involved in several processes, including anterior/posterior pattern specification; embryo development; and self proteolysis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN01133
    Corresponding_CDS_history: CBN01133:np197
      CBN01133:np198
    Corresponding_transcript: CBN01133.1
    Other_sequence (25)
  Experimental_info: Microarray_results: GPL14142_CBN01133_2526-2585_0.838_68_B
      GPL14142_CBN01133_3180-3239_0.957_1_A
  Method: Gene