WormBase Tree Display for Gene: WBGene00141238

WBGene00141238 SMap: S_parent: Sequence: Cbre_Contig225
  Identity: Version: 3
    Name: CGC_name: Cbn-tat-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN02513
      Molecular_name: CBN02513
        CBN02513.1
        CN32004
      Public_name: Cbn-tat-2.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 02 Mar 2009 17:57:16 WBPerson615 Event: Acquires_merge: WBGene00145901
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-tat-2.2
      Acquires_merge: WBGene00145901
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tat
    RNASeq_FPKM: WBls:0000002 0.088337 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.209312 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.330287 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.432276 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0.579737 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.990028 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        1.81907 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        2.13737 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
      WBls:0000004 0.315796 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.631593 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 1.4102 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        1.68227 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.20799 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        2.38778 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        2.71327 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 4.16689 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        4.27413 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        4.38137 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 1.89318 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.42669 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00204136
      00204137
      00204138
      00204139
      00204140
      00204141
      00204142
      00204143
    Ortholog (39)
    Paralog (12)
    Structured_description: Automated_description: Predicted to enable ATP hydrolysis activity; ATPase-coupled intramembrane lipid transporter activity; and ion binding activity. Predicted to be involved in phospholipid transport. Predicted to be located in membrane. Is an ortholog of C. elegans tat-2. In C. elegans, tat-2 is involved in sterol metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN02513
    Corresponding_CDS_history: CBN02513:np200
    Corresponding_transcript: CBN02513.1
    Other_sequence (16)
  Experimental_info: Microarray_results: GPL14142_CBN02513_1528-1587_0.796_89_C
      GPL14142_CBN02513_2009-2068_0.777_136_B
      GPL14142_CBN02513_3624-3683_0.894_7_A
  Method: Gene