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WormBase Tree Display for Gene: WBGene00143024

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Name Class

WBGene00143024SMapS_parentSequenceCbre_Contig174
IdentityVersion2
NameCGC_nameCbn-glf-1.2From_analysisInferred_from_orthology
Sequence_nameCBN04299
Molecular_nameCBN04299
CBN04299.1
CN15528
Public_nameCbn-glf-1.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-glf-1.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglf
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.97863From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
7.95725From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240.191004From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0.351329From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0.658791From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
1.18758From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
1.9804From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:0000038128.317From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
130.477From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
132.637From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (15)
WBls:000010113.7769From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
4.01741From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00205619
Ortholog (33)
ParalogWBGene00149068Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00139388Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00150575Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154438Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156150Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158499Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160220Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191299Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192643Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193490Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans glf-1. In C. elegans, glf-1 is involved in polysaccharide biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN04299
Corresponding_transcriptCBN04299.1
Other_sequence (20)
Experimental_infoMicroarray_resultsGPL14142_CBN04299_841-900_0.914_7_C
GPL14142_CBN04299_1185-1244_0.932_4_A
GPL14142_CBN04299_1318-1377_0.953_1_B
MethodGene