WormBase Tree Display for Gene: WBGene00143219

WBGene00143219 SMap: S_parent: Sequence: Cbre_Contig373
  Identity: Version: 2
    Name: CGC_name: Cbn-spp-10.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN04494
      Molecular_name: CBN04494
        CBN04494.1
        CN22736
      Other_name: CBN04494
        Cbn-spp-10 From_analysis: Inferred_from_orthology
      Public_name: Cbn-spp-10.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-spp-10
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-spp-10.2
                Other_name: Cbn-spp-10
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: spp
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 13.2862 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        6.6431 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        61.6386 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        69.1975 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        77.6677 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        81.3922 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        99.4912 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 143.298 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        143.996 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        144.694 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 83.2571 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        85.1122 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00205789
      00205790
      00205791
    Ortholog (35)
    Paralog: WBGene00152225 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194394 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00164255 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00153236 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00159700 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in sphingolipid metabolic process. Predicted to be located in lysosome. Is an ortholog of C. elegans spp-10. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN04494
    Corresponding_transcript: CBN04494.1
    Other_sequence: CBC02349_2
      CR11447
      HGC02311_1
      HG02174
  Experimental_info: Microarray_results: GPL14142_CBN04494_116-175_0.878_26_B
      GPL14142_CBN04494_163-222_0.856_36_C
      GPL14142_CBN04494_336-395_0.692_89_A
  Method: Gene