WormBase Tree Display for Gene: WBGene00143778

WBGene00143778 SMap: S_parent: Sequence: Cbre_Contig438
  Identity: Version: 6
    Name: CGC_name: Cbn-dur-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN05053
      Molecular_name: CBN05053
        CBN05053.1
        CN15602
      Public_name: Cbn-dur-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-dur-1.1
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Cbn-dur-1.1
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Cbn-dur-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dur
    RNASeq_FPKM: WBls:0000002 12.1285 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        15.4887 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        16.437 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        3.74287 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        5.00068 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        6.52103 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        7.34813 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        7.73588 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        8.17523 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        9.86475 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
      WBls:0000004 0.191094 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.382188 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        23.4068 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        23.5183 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        26.1671 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        29.6479 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        37.0761 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 71.235 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        72.8607 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        74.4864 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 10.7292 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        10.8625 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        10.9959 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
        11.3024 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        12.1499 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        15.6877 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        16.2198 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        18.673 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        19.3037 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        21.2478 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        21.5085 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
        3.34813 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        3.61432 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        8.62864 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        9.1868 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        9.54481 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
      WBls:0000101 13.042 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        9.54481 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    Ortholog: WBGene00026320 Caenorhabditis briggsae From_analysis: OMA
      WBGene00072106 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073279 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123705 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g8341 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g8950 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g2151 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23815 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11796 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2800 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6700 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8515 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_20671.g26508 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g14373 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold585.g4835 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00103.g4376 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13736 Caenorhabditis latens From_analysis: WormBase-Compara
      Sp34_40253500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00001113 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrIV_pilon.g11451 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00158543 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00162312 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00145281 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00163025 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is an ortholog of C. elegans dur-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN05053
    Corresponding_transcript: CBN05053.1
    Other_sequence: CR07041
      CRC07912_1
  Remark: [190208 pad] The CGC name Cbn-dur-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbn-dur-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene