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WormBase Tree Display for Gene: WBGene00144503

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Name Class

WBGene00144503SMapS_parentSequenceCbre_Contig511
IdentityVersion2
NameCGC_nameCbn-sin-3From_analysisInferred_from_orthology
Sequence_nameCBN05778
Molecular_nameCBN05778
CBN05778.1
CN31949
Public_nameCbn-sin-3
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-sin-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsin
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
20.5793From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
41.1586From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.599From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
11.2826From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
11.4062From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
11.7906From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
12.8883From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000384.2022From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
4.49935From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
4.79651From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001016.01409From_analysisRNASeq.brenneri.total_over_all_stages.control_median
9.40528From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00206928
00206929
Ortholog (29)
ParalogWBGene00194092Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable transcription corepressor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans sin-3. In C. elegans, sin-3 is involved in several processes, including cell fate specification; nematode male tail mating organ morphogenesis; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05778
Corresponding_CDS_historyCBN05778:np200
Corresponding_transcriptCBN05778.1
Other_sequence (247)
Experimental_infoMicroarray_resultsGPL14142_CBN05778_2688-2747_0.700_411_A
MethodGene