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WormBase Tree Display for Gene: WBGene00144505

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Name Class

WBGene00144505SMapS_parentSequenceCbre_Contig2
IdentityVersion1
NameCGC_nameCbn-daf-6From_analysisInferred_from_orthology
Sequence_nameCBN05780
Molecular_nameCBN05780
CBN05780.1
CN13749
Other_nameCBN05780
Public_nameCbn-daf-6
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-daf-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdaf
RNASeq_FPKMWBls:00000020.205535From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.275088From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0.357945From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.440802From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0.578811From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.67307From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0.815074From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
1.46501From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
1.91353From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
WBls:00000040.447751From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
10.8895From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
5.66863From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000241.41339From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
1.55287From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
1.93092From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.61388From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
5.76946From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000389.26386From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
9.31369From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
9.36351From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (13)
WBls:00001010.447751From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.44626From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00206931
Ortholog (28)
Paralog (44)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans daf-6. In C. elegans, daf-6 is involved in several processes, including negative regulation of transcription by RNA polymerase II; positive regulation of dauer larval development; and regulation of insulin receptor signaling pathway.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN05780
Corresponding_transcriptCBN05780.1
Other_sequenceMA00829
Dviv_isotig25805
GR13379
GRC01680_1
JI166574.1
MCC05191_1
MC00788
Oden_isotig23367
MAC00273_1
Oden_isotig25088
Experimental_infoMicroarray_resultsGPL14142_CBN05780_1001-1060_0.812_100_A
GPL14142_CBN05780_2397-2456_0.947_3_B
GPL14142_CBN05780_2485-2544_0.952_2_C
MethodGene