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WormBase Tree Display for Gene: WBGene00145022

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Name Class

WBGene00145022SMapS_parentSequenceCbre_Contig124
IdentityVersion2
NameCGC_nameCbn-vps-4.2From_analysisInferred_from_orthology
Sequence_nameCBN06297
Molecular_nameCBN06297
CBN06297.1
CN04787
Public_nameCbn-vps-4.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-vps-4.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvps
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
23.0509From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
46.1019From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.6401From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
32.1682From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
34.8246From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
36.6715From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
42.6123From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003828.8305From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
29.7208From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
30.6111From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010120.0598From_analysisRNASeq.brenneri.total_over_all_stages.control_median
27.5352From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00207360
00207361
Ortholog (31)
Paralog (42)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans vps-4. In C. elegans, vps-4 is involved in mechanosensory behavior and protein localization to postsynaptic membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN06297
Corresponding_transcriptCBN06297.1
Other_sequence (18)
MethodGene