WormBase Tree Display for Gene: WBGene00145213

WBGene00145213 SMap: S_parent: Sequence: Cbre_Contig2
  Identity: Version: 1
    Name: CGC_name: Cbn-syg-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN06488
      Molecular_name: CBN06488
        CBN06488.1
        CN00569
      Other_name: CBN06488
      Public_name: Cbn-syg-2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-syg-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: syg
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 38.9288 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        6.48212 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        71.3754 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        4.33822 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        6.29754 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        6.99665 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        9.23565 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        9.90478 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 2.86139 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        3.27432 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.68726 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (16)
      WBls:0000101 1.1618 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.70436 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (28)
    Paralog: WBGene00150884 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00155690 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00193714 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194612 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; CD80-like C2-set immunoglobulin domain; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; Immunoglobulin subtype; and CD80-like, immunoglobulin C2-set. Is an ortholog of C. elegans syg-2. In C. elegans, syg-2 is involved in cell-cell signaling; nervous system development; and protein localization to synapse. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN06488
    Corresponding_transcript: CBN06488.1
    Other_sequence: CBC01465_1
      Acan_isotig18505
      FC548372.1
      JI164932.1
      Oden_isotig22075
      Dviv_isotig23744
      EY458919.1
      ACC18119_1
  Experimental_info: Microarray_results: GPL14142_CBN06488_2974-3033_0.903_7_C
      GPL14142_CBN06488_3040-3099_0.909_5_B
      GPL14142_CBN06488_3251-3310_0.892_14_A
  Method: Gene