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WormBase Tree Display for Gene: WBGene00145682

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Name Class

WBGene00145682SMapS_parentSequenceCbre_Contig8
IdentityVersion2
NameCGC_nameCbn-cah-3From_analysisInferred_from_orthology
Sequence_nameCBN06957
Molecular_nameCBN06957
CBN06957.1
CN30026
Public_nameCbn-cah-3
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-cah-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcah
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.203751From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.407501From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
58.5074From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
61.9551From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
66.0991From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
67.2168From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
87.9048From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:000003886.481From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
88.2469From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
90.0129From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010126.5469From_analysisRNASeq.brenneri.total_over_all_stages.control_median
35.9223From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00207833
00207834
Ortholog (29)
ParalogWBGene00139058Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00140474Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00145525Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00159754Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00193333Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00193776Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carbonate dehydratase activity and zinc ion binding activity. Is an ortholog of C. elegans cah-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN06957
Corresponding_CDS_historyCBN06957:np197
Corresponding_transcriptCBN06957.1
Other_sequence (61)
Experimental_infoMicroarray_resultsGPL14142_CBN06957_102-161_0.902_8_C
GPL14142_CBN06957_433-492_0.890_12_B
GPL14142_CBN06957_637-696_0.965_1_A
MethodGene