WormBase Tree Display for Gene: WBGene00146524

WBGene00146524 SMap: S_parent: Sequence: Cbre_Contig454
  Identity: Version: 2
    Name: CGC_name: Cbn-efn-4.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN07799
      Molecular_name: CBN07799
        CBN07799.1
        CN15368
      Other_name: CBN07799
        Cbn-efn-4 From_analysis: Inferred_from_orthology
      Public_name: Cbn-efn-4.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-efn-4
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-efn-4.2
                Other_name: Cbn-efn-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: efn
    RNASeq_FPKM: WBls:0000002 0.490451 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.726593 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        12.0505 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        1.86331 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        3.00002 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        3.16877 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        4.87372 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        5.04977 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        5.49668 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
      WBls:0000004 16.6439 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        8.32195 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        5.05534 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        5.18052 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        6.61665 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.91842 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        8.33135 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 5.23806 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        5.61142 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.98479 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (11)
      WBls:0000101 0.86751 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        5.40953 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00208504
    Ortholog (23)
    Paralog: WBGene00146874 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00140455 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00159950 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00191437 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans efn-4. In C. elegans, efn-4 is involved in several processes, including embryonic morphogenesis; nematode male tail tip morphogenesis; and regulation of axon guidance. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN07799
    Corresponding_transcript: CBN07799.1
    Other_sequence: CRC05251_1
      CR02130
  Experimental_info: Microarray_results: GPL14142_CBN07799_696-755_0.722_120_A
  Method: Gene