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WormBase Tree Display for Gene: WBGene00146661

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Name Class

WBGene00146661SMapS_parentSequenceCbre_Contig118
IdentityVersion2
NameCGC_nameCbn-nhr-88.2From_analysisInferred_from_orthology
Sequence_nameCBN07936
Molecular_nameCBN07936
CBN07936.1
CN09819
Public_nameCbn-nhr-88.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-nhr-88.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.619095From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.23819From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:0000024116.471From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
28.5015From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
28.7693From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
65.8245From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
78.8149From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:000003817.1558From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
17.4221From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
17.6885From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:00001015.96016From_analysisRNASeq.brenneri.total_over_all_stages.control_median
8.65567From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00208578
00208579
00208580
00208581
00208582
00208583
Ortholog (16)
Paralog (243)
Structured_descriptionAutomated_descriptionPredicted to enable nuclear receptor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-88.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN07936
Corresponding_transcriptCBN07936.1
Other_sequenceCBC11377_1
JI170838.1
MP01671
Experimental_infoMicroarray_resultsGPL14142_CBN07936_999-1058_0.904_19_C
GPL14142_CBN07936_1099-1158_0.848_62_B
GPL14142_CBN07936_1183-1242_0.900_21_A
MethodGene