WormBase Tree Display for Gene: WBGene00148329

WBGene00148329 SMap: S_parent: Sequence: Cbre_Contig76
  Identity: Version: 2
    Name: CGC_name: Cbn-vps-28.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN09604
      Molecular_name: CBN09604
        CBN09604.1
        CN10273
      Public_name: Cbn-vps-28.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-vps-28.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000002 0.636978 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        1.18554 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        13.6093 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        14.0267 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.85873 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        19.9015 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.53192 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        2.85555 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        5.47475 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        49.7791 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        99.5582 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        51.9142 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        75.2325 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        96.42 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        96.7739 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        99.8222 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 82.2114 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        84.6467 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        87.082 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 32.4812 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        35.1193 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00209909
      00209910
    Ortholog (32)
    Paralog: WBGene00155028 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00193861 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in endosome transport via multivesicular body sorting pathway. Predicted to be part of ESCRT I complex. Is an ortholog of C. elegans vps-28. In C. elegans, vps-28 is involved in receptor catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN09604
    Corresponding_transcript: CBN09604.1
    Other_sequence (13)
  Experimental_info: Microarray_results: GPL14142_CBN09604_659-718_0.926_3_A
  Method: Gene