WormBase Tree Display for Gene: WBGene00150629

WBGene00150629 SMap: S_parent: Sequence: Cbre_Contig110
  Identity: Version: 1
    Name: CGC_name: Cbn-hop-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN11904
      Molecular_name: CBN11904
        CBN11904.1
        CN13763
      Other_name: CBN11904
      Public_name: Cbn-hop-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-hop-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hop
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 12.0885 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        24.1771 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0.548161 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0.673192 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        1.02252 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        1.51561 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.94103 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 2.86499 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        4.18863 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.51228 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 10.8605 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        18.3687 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00211818
      00211819
      00211820
    Ortholog (23)
    Paralog: WBGene00162549 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00193767 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00194576 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable aspartic endopeptidase activity, intramembrane cleaving. Predicted to be involved in protein processing. Predicted to be located in membrane. Is an ortholog of C. elegans hop-1. In C. elegans, hop-1 is involved in several processes, including egg-laying behavior; positive regulation of Notch signaling pathway; and regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN11904
    Corresponding_transcript: CBN11904.1
    Other_sequence: CRC04478_1
      CR03774
  Experimental_info: Microarray_results: GPL14142_CBN11904_898-957_0.959_1_A
  Method: Gene