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WormBase Tree Display for Gene: WBGene00151795

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Name Class

WBGene00151795SMapS_parentSequenceCbre_Contig0
IdentityVersion1
NameCGC_nameCbn-vang-1From_analysisInferred_from_orthology
Sequence_nameCBN13070
Molecular_nameCBN13070
CBN13070.1
CN19663
Other_nameCBN13070
Public_nameCbn-vang-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-vang-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvang
RNASeq_FPKMWBls:00000020.5833From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0.706364From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.796888From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.887413From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.40764From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.78122From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
1.89521From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
3.89348From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
4.32945From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:0000004182.163From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
30.6819From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
333.644From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.14047From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
3.36735From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
3.87144From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
5.12073From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
5.57219From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000380.846116From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
1.53251From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.21891From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000410.337057From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
0.426027From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
0.769955From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0.930978From_analysisRNASeq.brenneri.WBls:0000041.control_median
1.092From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
1.26628From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
1.42506From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
1.72656From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
40.8399From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
4.26304From_analysisRNASeq.brenneri.WBls:0000041.control_mean
5.94579From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
6.68608From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
7.69386From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
WBls:00001010.887413From_analysisRNASeq.brenneri.total_over_all_stages.control_median
14.5057From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00212784
00212785
OrthologWBGene00015171Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00025173Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00058217Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00108358Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00124620Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g2832Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1606Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2296Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18836Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15757Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18395Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5720Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18519Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1265Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12558Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00446.g10953Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vang-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4676Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00156.g5840Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01057Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023850Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00495Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g19213Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g24131Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0095300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00222056Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g18671Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241470Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257291Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266247Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290626Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans vang-1. In C. elegans, vang-1 is involved in Wnt signaling pathway, planar cell polarity pathway and digestive tract morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN13070
Corresponding_transcriptCBN13070.1
Other_sequenceDviv_isotig25288
CRC09117_1
JI169540.1
CR10029
Tcol_isotig13997
Hbac_isotig04863
FK805588.1
BXC00757_1
Oden_isotig20956
Acan_isotig04476
Dviv_isotig30070
Experimental_infoMicroarray_resultsGPL14142_CBN13070_513-572_0.831_93_B
GPL14142_CBN13070_583-642_0.867_55_C
GPL14142_CBN13070_765-824_0.850_71_A
MethodGene