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WormBase Tree Display for Gene: WBGene00151995

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Name Class

WBGene00151995SMapS_parentSequenceCbre_Contig2
IdentityVersion1
NameCGC_nameCbn-unc-3From_analysisInferred_from_orthology
Sequence_nameCBN13270
Molecular_nameCBN13270
CBN13270.1
CN16160
Other_nameCBN13270
Public_nameCbn-unc-3
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000021.05575From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
1.29158From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.34611From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
2.40115From_analysisRNASeq.brenneri.WBls:0000002.control_median
2.4562From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
2.65485From_analysisRNASeq.brenneri.WBls:0000002.control_mean
3.94407From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
4.19649From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
4.5113From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
6.74701From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:000000416.9927From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
30.0161From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.96935From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.70957From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
4.57223From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
5.59338From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
5.67057From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
7.57395From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:00000382.14492From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
2.47803From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.81115From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:00000410.329002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0.471175From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
0.633782From_analysisRNASeq.brenneri.WBls:0000041.control_median
0.796389From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.843066From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.914078From_analysisRNASeq.brenneri.WBls:0000041.control_mean
1.09124From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
1.11828From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
1.18061From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
1.26855From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.05511From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
5.47183From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
WBls:00001011.11828From_analysisRNASeq.brenneri.total_over_all_stages.control_median
2.58436From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00212963
00212964
00212965
OrthologWBGene00006743Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00029583Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00058555Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00110071Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00119650Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g2839Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15800Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16856Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g23179Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25081Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9744Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18768Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16929Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8761Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00272.g8258Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10038Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00144.g5548Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01698Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025639Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07560Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2071Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0141800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00226557Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g20643Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240610Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00265590Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291761Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and protein dimerization activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-3. In C. elegans, unc-3 is involved in several processes, including dauer larval development; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN13270
Corresponding_transcriptCBN13270.1
Other_sequenceOden_isotig27276
Dviv_isotig17673
JI483191.1
JI169840.1
HG09043
HGC03821_1
JI479932.1
Dviv_isotig17674
EY471539.1
JI477650.1
ACC17660_1
JI459868.1
JI463667.1
EY470726.1
EY470722.1
Experimental_infoMicroarray_resultsGPL14142_CBN13270_717-776_0.906_14_C
GPL14142_CBN13270_1018-1077_0.934_4_B
GPL14142_CBN13270_1114-1173_0.921_6_A
MethodGene