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WormBase Tree Display for Gene: WBGene00153241

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Name Class

WBGene00153241SMapS_parentSequenceCbre_Contig73
IdentityVersion1
NameCGC_nameCbn-sms-3From_analysisInferred_from_orthology
Sequence_nameCBN14516
Molecular_nameCBN14516
CBN14516.1
CN14615
Other_nameCBN14516
Public_nameCbn-sms-3
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-sms-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsms
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
2.5182From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
5.0364From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002415.178From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
15.3214From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
15.7993From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
20.9977From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
8.67925From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003810.6604From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
12.376From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
14.0916From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (16)
WBls:000010120.219From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
7.78507From_analysisRNASeq.brenneri.total_over_all_stages.control_median
Ortholog (33)
ParalogWBGene00147899Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151494Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151551Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00156021Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00163081Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: PAP2 superfamily C-terminal and Sphingomyelin synthase-like domain. Is an ortholog of C. elegans sms-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN14516
Corresponding_transcriptCBN14516.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL14142_CBN14516_607-666_0.829_40_C
GPL14142_CBN14516_646-705_0.933_8_A
GPL14142_CBN14516_745-804_0.919_12_B
MethodGene