WormBase Tree Display for Gene: WBGene00153781

WBGene00153781 SMap: S_parent: Sequence: Cbre_Contig473
  Identity: Version: 2
    Name: CGC_name: Cbn-mtrf-1L.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15056
      Molecular_name: CBN15056
        CBN15056.1
        CN13372
      Public_name: Cbn-mtrf-1L.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbn-mtrf-1L.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mtrf
    RNASeq_FPKM: WBls:0000002 0.345325 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.516027 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.680475 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.801029 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.844924 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        1.29115 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        1.37263 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.59386 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.04637 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
      WBls:0000004 1.75479 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        3.50958 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.5357 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        11.8115 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        15.33 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        20.5054 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        9.26161 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 6.86532 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        7.21655 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        7.56778 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 11.1934 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        13.9824 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        14.9053 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        2.96971 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        4.37416 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        4.95733 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        4.95909 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        5.34719 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        5.54461 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        5.73529 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        6.2697 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        6.34863 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        6.37327 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
        6.64546 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
      WBls:0000101 2.04637 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.69893 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00214349
      00214350
    Ortholog: WBGene00020993 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00039181 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064037 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073645 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00133104 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g11367 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6784 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10946 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6475 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8049 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24816 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1660 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g18276 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1075 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g11571 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g3355 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1129 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_02381.g17127 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02786.g17513 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_04383.g18809 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_08288.g21416 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_24824.g27229 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-W03F8.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold41.g213 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00372.g10326 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11860 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013511 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g14983 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40337220 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00234233 Brugia malayi From_analysis: WormBase-Compara
      chrIV_pilon.g10370 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240880 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263215 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287837 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00145656 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable translation release factor activity. Predicted to be involved in translational termination. Is an ortholog of C. elegans mtrf-1L. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15056
    Corresponding_transcript: CBN15056.1
    Other_sequence: CBC06581_1
      CR03978
      CJC02040_1
      CRC09428_1
      ACC04547_1
      Oden_isotig23681
      HGC02779_1
      Acan_isotig04635
      Acan_isotig04634
      Dviv_isotig13495
      HG00860
      HC01117
  Experimental_info: Microarray_results: GPL14142_CBN06931_451-510_0.758_157_A
      GPL14142_CBN06931_740-799_0.940_3_C
      GPL14142_CBN06931_1008-1067_0.786_131_B
  Method: Gene