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WormBase Tree Display for Gene: WBGene00154599

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Name Class

WBGene00154599SMapS_parentSequenceCbre_Contig116
IdentityVersion2
NameCGC_nameCbn-col-19From_analysisInferred_from_orthology
Sequence_nameCBN15874
Molecular_nameCBN15874
CBN15874.1
CN28806
Public_nameCbn-col-19
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-col-19
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240.688165From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0.951355From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
1.05491From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
1.26929From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
1.71163From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:000003812.6912From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
13.2126From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
13.7339From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001011353.57From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
588.134From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00214999
Ortholog (42)
Paralog (194)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-19. In C. elegans, col-19 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN15874
Corresponding_CDS_historyCBN15874:np198
Corresponding_transcriptCBN15874.1
Other_sequence (65)
Experimental_infoMicroarray_resultsGPL14142_CBN15874_164-223_0.896_2_C
GPL14142_CBN15874_336-395_0.664_62_A
GPL14142_CBN15874_777-836_0.661_66_B
MethodGene