WormBase Tree Display for Gene: WBGene00155028

WBGene00155028 SMap: S_parent: Sequence: Cbre_Contig91
  Identity: Version: 2
    Name: CGC_name: Cbn-vps-28.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN16303
      Molecular_name: CBN16303
        CBN16303.1
        CN07174
      Public_name: Cbn-vps-28.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-vps-28.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vps
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 16.5033 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        8.25165 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        32.1462 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        36.2945 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        40.2924 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        41.0626 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        44.6782 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 13.3817 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        15.4143 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        17.447 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 10.9863 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        12.6322 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00215323
      00215324
    Ortholog (32)
    Paralog: WBGene00148329 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00193861 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in endosome transport via multivesicular body sorting pathway. Predicted to be part of ESCRT I complex. Is an ortholog of C. elegans vps-28. In C. elegans, vps-28 is involved in receptor catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN16303
    Corresponding_transcript: CBN16303.1
    Other_sequence: CGC01365_1
      Dviv_isotig05822
      Tcir_isotig07967
      Dviv_isotig05819
      Dviv_isotig05824
  Method: Gene