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WormBase Tree Display for Gene: WBGene00155088

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Name Class

WBGene00155088SMapS_parentSequenceCbre_Contig2
IdentityVersion3
NameSequence_nameCBN16363
Molecular_nameCBN16363
CBN16363.1
CN18989
Public_nameCBN16363
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
204 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameCbn-jmjd-3.1.1
304 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.058646From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.073893From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.196555From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0.316016From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
RNASeq.brenneri.WBls:0000002.control_median
WBls:000000413.593From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
2.37532From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
24.8106From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240.639522From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0.736995From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0.962049From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
1.18544From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
1.20501From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000380.343066From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0.37582From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.408574From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (13)
WBls:00001010.04186From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.02325From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00215367
00215368
OrthologCSP28.g18190Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5253Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g5255Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g6319Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g14751Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2094Caenorhabditis tribulationisFrom_analysisWormBase-Compara
GCK72_025467Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to enable histone acetyltransferase activity. Predicted to be involved in regulation of DNA-templated transcription.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16363
Corresponding_transcriptCBN16363.1
Experimental_infoMicroarray_resultsGPL14142_CBN16363_3158-3217_0.684_555_A
Remark[200603 pad] The CGC name Cbn-jmjd-3.1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene