WormBase Tree Display for Gene: WBGene00156108

WBGene00156108 SMap: S_parent: Sequence: Cbre_Contig37
  Identity: Version: 3
    Name: CGC_name: Cbn-che-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBN17383
      Molecular_name: CBN17383
        CBN17383.1
        CN12794
      Other_name: Cbn-cng-4 From_analysis: Inferred_from_orthology
      Public_name: Cbn-che-6
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 12 Jul 2011 12:19:59 WBPerson2970 Name_change: CGC_name: Cbn-cng-4
        3 15 Aug 2012 10:38:31 WBPerson2970 Name_change: CGC_name: Cbn-che-6
                Other_name: Cbn-cng-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: che
    RNASeq_FPKM: WBls:0000002 0.013502 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.135022 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
            RNASeq.brenneri.WBls:0000002.control_median
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
            RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
            RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0.16692 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0.411551 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0.536946 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0.556727 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0.822201 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 0.056173 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        0.1405 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        0.224827 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 0.056923 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        0.095594 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        0.144808 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        0.15902 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        0.19648 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        0.340479 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        0.62511 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        0.843317 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
            RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
            RNASeq.brenneri.WBls:0000041.control_median
      WBls:0000101 0.08816 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00216233
      00216234
      00216235
      00216236
    Ortholog: WBGene00000487 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00041056 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00068888 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g8797 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16122 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g6191 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21363 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g4705 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g4707 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12975 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6156 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g16017 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00092.g4117 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10738 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01061.g18056 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15565 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016060 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10794 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40038300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9766 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00141301 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00142813 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00147705 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00192193 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00160763 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00190538 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00191033 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193894 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans che-6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN17383
    Corresponding_transcript: CBN17383.1
    Other_sequence: Dviv_isotig18139
      Acan_isotig16606
  Experimental_info: Microarray_results: GPL14142_CBN17383_954-1013_0.894_36_B
      GPL14142_CBN17383_1094-1153_0.686_233_C
      GPL14142_CBN17383_1134-1193_0.894_37_A
  Method: Gene