WormBase Tree Display for Gene: WBGene00156585

WBGene00156585 SMap: S_parent: Sequence: Cbre_Contig5
  Identity: Version: 2
    Name: CGC_name: Cbn-mmab-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN17860
      Molecular_name: CBN17860
        CBN17860.1
        CN28474
      Public_name: Cbn-mmab-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-mmab-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mmab
    RNASeq_FPKM: WBls:0000002 11.9815 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        14.3813 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        15.6661 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        16.7082 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        17.7503 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        18.3222 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        20.7991 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        23.8125 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        27.1186 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        8.36245 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
      WBls:0000004 174.839 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        30.3695 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        319.309 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 13.8118 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        15.7303 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        15.8569 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        17.6254 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        20.3582 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 30.3846 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        30.7923 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        31.2 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 16.3995 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
        25.0706 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
        26.7598 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
        28.0201 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
        28.0571 From_analysis: RNASeq.brenneri.WBls:0000041.control_median
        28.0941 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
        33.7604 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
        34.0738 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
        37.2354 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
        49.3598 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
        618.181 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
        6.2169 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
        6.55408 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
        69.0166 From_analysis: RNASeq.brenneri.WBls:0000041.control_mean
        89.6616 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
        95.3253 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
        9.55273 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
      WBls:0000101 25.0706 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        53.5271 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog: WBGene00016144 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00037656 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00061660 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00114195 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00121664 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g5120 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12491 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1543 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19887 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11580 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5596 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2714 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6626 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4079 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1190 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_06733.g20452 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g10192 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14365 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00253.g8014 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_23681 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009981 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13330 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8914 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30055900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7593 Caenorhabditis elegans From_analysis: WormBase-Compara
      nigoni.pc_2016.07.11_023.g28465 Caenorhabditis nigoni From_analysis: WormBase-Compara
      WBGene00255980 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291750 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cobalamin adenosyltransferase-like superfamily; Cobalamin adenosyltransferase; Cobalamin adenosyltransferase-like; and ATP:cob(I)alamin adenosyltransferase, PduO-type. Is an ortholog of C. elegans mmab-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN17860
    Corresponding_CDS_history: CBN17860:np197
    Corresponding_transcript: CBN17860.1
    Other_sequence: JI169405.1
      AS16709
      PTC01047_1
      HC02140
      JO473514.1
      GW412070.1
      Acan_isotig11727
      Tcol_isotig06369
      AS14169
      Tcir_isotig05534
      Oden_isotig01899
      Tcol_isotig06370
      Oden_isotig01900
      AE04031
      PSC01364
      SRC00810_1
      AYC02761_1
      Oden_isotig01898
      FC813285.1
      HCC04724_1
      Tcol_isotig06368
      AS11790
      ASC03571_1
      Oden_isotig01901
      Dviv_isotig11193
      GW406769.1
      HC00267
      Name_isotig02303
      PT00095
      Tcir_isotig12351
      Oden_isotig01897
      GW409262.1
  Experimental_info: Microarray_results: GPL14142_CBN17860_75-134_0.871_19_B
      GPL14142_CBN17860_170-229_0.669_57_A
      GPL14142_CBN17860_224-283_0.900_11_C
  Method: Gene