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WormBase Tree Display for Gene: WBGene00157201

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Name Class

WBGene00157201SMapS_parentSequenceCbre_Contig32
IdentityVersion5
NameCGC_nameCbn-odr-7From_analysisInferred_from_orthology
Sequence_nameCBN18476
Molecular_nameCBN18476
CBN18476.1
CN02984
Other_nameCBN18476
Public_nameCbn-odr-7
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-odr-7
208 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
308 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCbn-odr-7
428 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
528 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbn-odr-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classodr
RNASeq_FPKMWBls:00000020From_analysis (12)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000380From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
RNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
WBls:00000410.012771From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0.101078From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
0.103252From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0From_analysis (15)
WBls:00001010.006591From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00217103
00217104
00217105
00217106
Ortholog (28)
Paralog (223)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans odr-7. In C. elegans, odr-7 is involved in negative adaptation of signaling pathway; positive chemotaxis; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN18476
Corresponding_transcriptCBN18476.1
Other_sequenceJI212760.1
Oden_isotig27838
Experimental_infoMicroarray_resultsGPL14142_CBN18476_393-452_0.904_14_A
GPL14142_CBN18476_508-567_0.956_1_B
GPL14142_CBN18476_519-578_0.956_2_C
Remark[190208 pad] The CGC name Cbn-odr-7 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbn-odr-7 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene