WormBase Tree Display for Gene: WBGene00157643

WBGene00157643 SMap: S_parent: Sequence: Cbre_Contig2
  Identity: Version: 1
    Name: CGC_name: Cbn-nipi-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN18918
      Molecular_name: CBN18918
        CBN18918.1
        CN20346
      Other_name: CBN18918
      Public_name: Cbn-nipi-3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-nipi-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nipi
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 28.1234 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        4.80917 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        51.4377 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        52.1144 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        52.855 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        68.8256 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        84.6938 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        97.8006 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 30.9708 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        31.916 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        32.8613 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (18)
      WBls:0000101 11.3107 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        16.0595 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00217503
      00217504
      00217505
    Ortholog (22)
    Paralog: WBGene00139305 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00144074 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00154758 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158836 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193317 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans nipi-3. In C. elegans, nipi-3 is involved in defense response to other organism and regulation of gene expression. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN18918
    Corresponding_transcript: CBN18918.1
    Other_sequence: CBC12317_1
      CR04824
      CRC00651_1
      CJC06811_1
      CR06179
  Experimental_info: Microarray_results: GPL14142_CBN18918_648-707_0.856_49_C
      GPL14142_CBN18918_1216-1275_0.908_11_A
      GPL14142_CBN18918_1779-1838_0.856_47_B
  Method: Gene