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WormBase Tree Display for Gene: WBGene00158784

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Name Class

WBGene00158784SMapS_parentSequenceCbre_Contig28
IdentityVersion1
NameCGC_nameCbn-unc-53From_analysisInferred_from_orthology
Sequence_nameCBN20059
Molecular_nameCBN20059
CBN20059.1
CN19659
Other_nameCBN20059
Public_nameCbn-unc-53
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-53
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.15731From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
4.63448From_analysisRNASeq.brenneri.WBls:0000002.control_mean
5.19618From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
5.85859From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
5.91047From_analysisRNASeq.brenneri.WBls:0000002.control_median
5.96235From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
6.68184From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
6.77382From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
6.83979From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
6.8749From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
3.7201From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
7.44021From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.7331From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
29.7137From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
33.168From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
35.6387From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
38.2874From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003810.3572From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
11.1756From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
11.9941From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004111.2071From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
13.8983From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
1.54151From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.90424From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
3.51507From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
3.51769From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
4.24653From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
4.25356From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
4.3164From_analysisRNASeq.brenneri.WBls:0000041.control_median
4.37924From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
4.70034From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
5.24361From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
5.28409From_analysisRNASeq.brenneri.WBls:0000041.control_mean
6.55596From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
8.62579From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
9.95655From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
WBls:00001015.18328From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
5.19618From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00218368
OrthologWBGene00006788Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00025929Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00053499Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00102860Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00135997Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g6509Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1769Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17096Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1135Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9104Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16601Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2472Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2950Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3757Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11590Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00033.g1888Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00981.g15216Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11386.g23208Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-53Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16342Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00037.g2027Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18819Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005421Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02553Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17295Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20337300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00224368Brugia malayiFrom_analysisWormBase-Compara
chrII_pilon.g5869Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246889Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267279Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00295310Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in neurogenesis. Is an ortholog of C. elegans unc-53. In C. elegans, unc-53 is involved in several processes, including backward locomotion; positive regulation of locomotion; and reproductive behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN20059
Corresponding_transcriptCBN20059.1
Other_sequenceAcan_isotig07609
JI460765.1
CR11145
JI164328.1
FC544694.1
Hbac_isotig05496
FK808267.1
Oden_isotig08811
Oden_isotig08815
AM743289.1
Tcir_isotig22826
ACC17235_1
Dviv_isotig11568
Oden_isotig08814
ACC08706_1
Oden_isotig24198
Hbac_isotig04266
JI469902.1
CRC05266_1
FC540900.1
EX538669.1
JI164128.1
Tcol_isotig13753
Oden_isotig08813
CR11146
ACC28346_1
TDC02939_1
Oden_isotig08812
JI482542.1
Dviv_isotig11567
Experimental_infoMicroarray_resultsGPL14142_CBN20059_4700-4759_0.930_4_C
GPL14142_CBN20059_4778-4837_0.930_3_B
GPL14142_CBN20059_5006-5065_0.940_1_A
MethodGene