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WormBase Tree Display for Gene: WBGene00160105

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Name Class

WBGene00160105SMapS_parentSequenceCbre_Contig21
IdentityVersion6
NameCGC_nameCbn-tmbi-4From_analysisInferred_from_orthology
Sequence_nameCBN21380
Molecular_nameCBN21380
CBN21380.1
CN38315
Other_nameCBN21380
Public_nameCbn-tmbi-4
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:29WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-tmbi-4
218 May 2012 16:47:57WBPerson615EventAcquires_mergeWBGene00157904
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_nameCbn-tmbi-4
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbn-tmbi-4
Acquires_mergeWBGene00157904
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtmbi
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
28.578From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
4.53977From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
4.8477From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
4.97334From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
5.49797From_analysisRNASeq.brenneri.WBls:0000002.control_median
6.02261From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
6.07481From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
6.94848From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
7.01152From_analysisRNASeq.brenneri.WBls:0000002.control_mean
8.13053From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
WBls:000000415.2253From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
7.61265From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
51.755From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
56.8527From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
76.3189From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
76.9968From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
86.8299From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:0000038104.578From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
105.693From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
106.809From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000410From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
34.8381From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
36.5229From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
36.658From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
43.291From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
51.2383From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
53.5251From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
53.6949From_analysisRNASeq.brenneri.WBls:0000041.control_mean
59.6802From_analysisRNASeq.brenneri.WBls:0000041.control_median
65.8354From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
68.254From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
72.9221From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
74.8191From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
75.2119From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
79.308From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
80.8273From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
85.8666From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
WBls:000010134.8381From_analysisRNASeq.brenneri.total_over_all_stages.control_median
37.2853From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00023627Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00051096Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00084927Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00114482Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g2792Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g17726Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3629Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4332Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21383Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17315Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g103Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g22446Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19484Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-tmbi-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18740Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01650.g22295Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_03455Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025038Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04210Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10442Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0226900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00006479Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00123901Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00222113Brugia malayiFrom_analysisWormBase-Compara
chrX_pilon.g19693Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240527Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00289141Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00139635Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144440Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148497Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154745Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162966Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194236Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Inhibitor of apoptosis-promoting Bax1 and Bax inhibitor 1-related. Is an ortholog of C. elegans tmbi-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN21380
Corresponding_CDS_historyCBN21380:np232
Corresponding_transcriptCBN21380.1
Other_sequenceCBC03409_1
CBC03513_1
EX915400.1
Hbac_isotig02472
EL890257.1
CJC16257_1
CSC01320_1
Acan_isotig16528
HBC17765_1
FD514948.1
CJC09874_1
CJC01346_1
PVC01956_1
Experimental_infoMicroarray_resultsGPL14142_CBN19179_174-233_0.713_24_B
GPL14142_CBN19179_241-300_0.869_5_A
GPL14142_CBN19179_476-535_0.942_1_C
GPL14142_CBN21380_105-164_0.694_11_B
GPL14142_CBN21380_163-222_0.692_12_C
GPL14142_CBN21380_276-335_0.919_1_A
Remark[190208 pad] The CGC name Cbn-tmbi-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbn-tmbi-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene