WormBase Tree Display for Gene: WBGene00161145

WBGene00161145 SMap: S_parent: Sequence: Cbre_Contig2
  Identity: Version: 1
    Name: CGC_name: Cbn-pqn-39 From_analysis: Inferred_from_orthology
      Sequence_name: CBN22420
      Molecular_name: CBN22420
        CBN22420.1
        CN05567
      Other_name: CBN22420
      Public_name: Cbn-pqn-39
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-pqn-39
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pqn
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 122.385 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        12.6794 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        67.5322 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        21.7888 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        22.9108 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        23.8019 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        26.0871 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        26.3565 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 13.6539 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        13.9624 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        14.2709 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 11.3077 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        6.43223 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00220360
      00220361
      00220362
      00220363
    Ortholog (14)
    Structured_description: Automated_description: Predicted to enable RNA binding activity and intramolecular transferase activity. Predicted to be involved in pseudouridine synthesis. Is an ortholog of C. elegans pqn-39. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN22420
    Corresponding_transcript: CBN22420.1
    Other_sequence: DVC02658_1
      EV852087.1
      ES409561.1
      CRC10758_1
  Experimental_info: Microarray_results: GPL14142_CBN22420_736-795_0.871_37_C
      GPL14142_CBN22420_957-1016_0.840_57_B
      GPL14142_CBN22420_1505-1564_0.806_92_A
  Method: Gene