WormBase Tree Display for Gene: WBGene00163060

WBGene00163060 SMap: S_parent: Sequence: Cbre_Contig761
  Identity: Version: 2
    Name: CGC_name: Cbn-hmp-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN24335
      Molecular_name: CBN24335
        CBN24335.1
        CN29068
      Public_name: Cbn-hmp-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-hmp-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hmp
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.50248 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        5.00496 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        5.69695 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        6.3072 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        6.58589 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        7.08385 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        7.93827 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 1.12605 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        1.73654 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        2.34704 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
      WBls:0000101 2.345 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.46545 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00221910
      00221911
      00221912
    Ortholog (34)
    Paralog: WBGene00145049 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00149071 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00162524 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194348 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00193145 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00157014 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193692 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable actin filament binding activity and cadherin binding activity. Predicted to be involved in cell adhesion. Is an ortholog of C. elegans hmp-1. In C. elegans, hmp-1 is involved in several processes, including cortical actin cytoskeleton organization; embryonic morphogenesis; and regulation of actin cytoskeleton organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN24335
    Corresponding_CDS_history: CBN24335:np199
    Corresponding_transcript: CBN24335.1
    Other_sequence (25)
  Experimental_info: Microarray_results: GPL14142_CBN06324_1961-2020_0.861_44_C
      GPL14142_CBN06324_2439-2498_0.914_14_A
      GPL14142_CBN06324_2599-2658_0.881_28_B
  Method: Gene