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WormBase Tree Display for Gene: WBGene00163314

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Name Class

WBGene00163314SMapS_parentSequenceCbre_Contig28
IdentityVersion1
NameCGC_nameCbn-rpn-9From_analysisInferred_from_orthology
Sequence_nameCBN24589
Molecular_nameCBN24589
CBN24589.1
CN23975
Other_nameCBN24589
Public_nameCbn-rpn-9
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-rpn-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpn
RNASeq_FPKMWBls:0000002 (11)
WBls:0000004179.663From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
89.8315From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
40.9228From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
42.0483From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
52.9539From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
53.9606From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
58.7752From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:0000038148.953From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
152.204From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
155.455From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:0000101105.469From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
97.6302From_analysisRNASeq.brenneri.total_over_all_stages.control_median
Ortholog (29)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Proteasome component (PCI) domain; Winged helix DNA-binding domain superfamily; PCI domain; and 26S Proteasome non-ATPase regulatory subunit 13. Is an ortholog of C. elegans rpn-9.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN24589
Corresponding_transcriptCBN24589.1
Other_sequence (75)
Experimental_infoMicroarray_resultsGPL14142_CBN24589_874-933_0.923_5_C
GPL14142_CBN24589_995-1054_0.944_1_A
GPL14142_CBN24589_1101-1160_0.942_2_B
MethodGene