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WormBase Tree Display for Gene: WBGene00164234

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Name Class

WBGene00164234SMapS_parentSequenceCbre_Contig13
IdentityVersion1
NameCGC_nameCbn-unc-50From_analysisInferred_from_orthology
Sequence_nameCBN25509
Molecular_nameCBN25509
CBN25509.1
CN00870
Other_nameCBN25509
Public_nameCbn-unc-50
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-50
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000213.0528From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
14.0661From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
16.8934From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
18.435From_analysisRNASeq.brenneri.WBls:0000002.control_mean
19.0492From_analysisRNASeq.brenneri.WBls:0000002.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
21.2051From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
21.846From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
24.6227From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
25.2441From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
47.42From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
28.5172From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
57.0343From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
30.6172From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
33.244From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
35.2039From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
39.0023From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
43.9177From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003868.7From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
68.8855From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
69.0709From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:00000410From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
22.4428From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
28.9376From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
29.6741From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
30.0094From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
30.7427From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
39.2528From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
41.2587From_analysisRNASeq.brenneri.WBls:0000041.control_median
43.2645From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
43.6891From_analysisRNASeq.brenneri.WBls:0000041.control_mean
54.3805From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
55.0992From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
57.7709From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
60.6056From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
65.8996From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
84.3795From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
96.5667From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
WBls:000010129.6741From_analysisRNASeq.brenneri.total_over_all_stages.control_median
34.78From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00006785Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00042682Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00055729Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00120915Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g4328Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7269Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14954Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9528Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15238Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2660Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15888Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3086Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16029Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14025Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g477Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-50Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7394Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00332.g9568Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13496Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010499Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08112Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22480Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30119200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00225887Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8842Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245977Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00204467Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262643Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288348Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: UNC-50 and UNC-50 family. Is an ortholog of C. elegans unc-50. In C. elegans, unc-50 is involved in receptor localization to synapse and regulation of muscle contraction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN25509
Corresponding_transcriptCBN25509.1
Other_sequenceCBC05290_1
HG01471
DN152853.1
ACC39928_1
MCC00757_1
Tcol_isotig13677
JI211064.1
AS12038
Dviv_isotig13779
ASC11556_1
Hbac_isotig04081
HG05147
LSC01606_1
ES561464.1
CR12389
AS11525
HGC02417_1
Dviv_isotig13782
MC01813
HGC12209_1
ASC03440_1
PPC07763_1
ACC00994_1
EX560400.1
TSC10828_1
Dviv_isotig13781
HQ116822.1
CD203435.1
ES570451.1
Tcir_isotig06429
XI04519
RSC04144_1
EX552533.1
Oden_isotig10343
HBC28200_1
Acan_isotig09116
FG619621.1
CR01169
HG05304
TSC10380_1
Dviv_isotig13780
XIC05042_1
HG05305
JI170874.1
CJC04265_1
CRC01927_1
HGC04896_1
BM517665.1
FG348790.1
EX562048.1
RS09206
Oden_isotig10344
Experimental_infoMicroarray_resultsGPL14142_CBN25509_229-288_0.874_19_A
GPL14142_CBN25509_742-801_0.952_2_B
GPL14142_CBN25509_858-917_0.954_1_C
MethodGene