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WormBase Tree Display for Gene: WBGene00164262

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Name Class

WBGene00164262SMapS_parentSequenceCbre_Contig28
IdentityVersion2
NameSequence_nameCBN25537
Molecular_nameCBN25537
CBN25537.1
CN19543
Other_nameCBN25537
Cbn-tag-180
Public_nameCBN25537
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-tag-180
203 Jul 2018 11:45:27WBPerson1983Name_changeCGC_nameRetired non-elegans tag gene names
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.20613From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0.656301From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.928583From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.10056From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
1.12952From_analysisRNASeq.brenneri.WBls:0000002.control_median
1.15848From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
1.30143From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
1.41556From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
1.55051From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
1.89686From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
WBls:00000040.216122From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.432245From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002413.1147From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
15.8719From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
15.9858From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
16.4185From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
7.65681From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:00000382.22399From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
2.46927From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.71456From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000410.478665From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.502236From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
0.606165From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0.634512From_analysisRNASeq.brenneri.WBls:0000041.control_median
0.66286From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.889802From_analysisRNASeq.brenneri.WBls:0000041.control_mean
1.10209From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
1.32637From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
1.3816From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
1.55868From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
1.66295From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.30977From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
2.64545From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
WBls:00001010.66286From_analysisRNASeq.brenneri.total_over_all_stages.control_median
0.932047From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00007041Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00025885Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00053546Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131037Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
CBOVI.g6569Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1950Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10713Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17507Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22003Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16649Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4152Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16913Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18129Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5921Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17770Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00305.g8879Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00305.g8890Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00305.g8891Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00305.g8892Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-tag-180Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold45.g259Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00116.g4738Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14206Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005368Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11085Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g377Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20332100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00128592Caenorhabditis japonicaFrom_analysisWormBase-Compara
chrII_pilon.g5920Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00278310Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267548Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00140848Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: VWA N-terminal; von Willebrand factor, type A; von Willebrand factor A-like domain superfamily; and von Willebrand factor type A domain. Is an ortholog of C. elegans tag-180.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN25537
Corresponding_transcriptCBN25537.1
Other_sequenceHbac_isotig02497
JI227071.1
ACC14937_1
FC549697.1
FC550251.1
Experimental_infoMicroarray_resultsGPL14142_CBN25537_1325-1384_0.801_84_C
GPL14142_CBN25537_1644-1703_0.832_62_B
GPL14142_CBN25537_2210-2269_0.820_68_A
MethodGene