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WormBase Tree Display for Gene: WBGene00179990

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Name Class

WBGene00179990SMapS_parentSequenceCjap.Contig6860
IdentityVersion5
NameCGC_nameCjp-mca-3.1From_analysisInferred_from_orthology
Sequence_nameCJA24418
Molecular_nameCJA24418a
CJA24418a.1
JA62383
CJA24418b
JA65411
CJA24418b.1
Public_nameCjp-mca-3.1
SpeciesCaenorhabditis japonica
HistoryVersion_change122 Jan 2009 15:16:36WBPerson4055EventImportedfrom WASHU
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
327 Nov 2019 12:48:14WBPerson1983Name_changeCGC_nameCjp-mca-3.1
404 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameRemoved
528 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-mca-3.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmca
RNASeq_FPKMWBls:000000467.8655From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002794.3811From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:0000038101.495From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
105.153From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
97.8366From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:000004128.4173From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
28.6718From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
29.4916From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
36.8352From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
40.5862From_analysisRNASeq.japonica.WBls:0000041.control_median
44.3371From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
50.878From_analysisRNASeq.japonica.WBls:0000041.control_mean
59.3403From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
82.2113From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
97.7193From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:000010159.3403From_analysisRNASeq.japonica.total_over_all_stages.control_median
59.4046From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00224422
00224423
00224424
00224425
Ortholog (32)
Paralog (24)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be located in membrane. Is an ortholog of C. elegans mca-3. In C. elegans, mca-3 is involved in several processes, including negative regulation of cytosolic calcium ion concentration; nematode larval development; and positive regulation of growth rate.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA24418a
CJA24418b
Corresponding_transcriptCJA24418a.1
CJA24418b.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1071300
Microarray_resultsGPL14145_CJA24418_156-215_0.852_1_A
Remark[200204 pad] The CGC name Cjp-mca-3.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene